CDS

Accession Number TCMCG057C06187
gbkey CDS
Protein Id XP_018468090.1
Location join(<21686557..21686816,21687016..21687092,21687391..21687483,21687625..21687848,21687949..21688167,21688278..21688281)
Gene LOC108839812
GeneID 108839812
Organism Raphanus sativus

Protein

Length 321aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018612588.1
Definition PREDICTED: histone deacetylase HDT1-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category S
Description rRNA processing
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11294        [VIEW IN KEGG]
ko:K14396        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03015        [VIEW IN KEGG]
ko05130        [VIEW IN KEGG]
ko05164        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
map05130        [VIEW IN KEGG]
map05164        [VIEW IN KEGG]
GOs GO:0001651        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005732        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
CTTGGCAAAAAAGCGAAAAAGGGGGGAGTATCTGCACTCTTGTATGCCACCGTCGATGACAAGAAACTCCTCCTCGGAACACTCTCTCAAGATAGCTTCCCTCACATCAACTTTGATCATCTCCTCTTCGACAGAGAATTCGAGCTTTCCCACAGCTTGGACAGAGGATATGTCCATTTCATTGGCCACCAGCGCAACAAGAAGAAGAAGAAGAGGGCTAATAATGAATCTTCCAAAGTGTCTGTCTCTTTCAATACAGGTAAGAGCGTGTTACAACCTTGTTTAGAGAGCAAAACAAATCTGAAGAAGCAGAAGATACACAATGAACATTCTGAGGAAATCAAAGAAATGAATAAATCTATCAAAGAGCTGTCTGAAGCTGTGAAAACGCTGCAACAGATTCTACTGAGAAAAGCCGATCTACCAGAGGAGAAAGAAGCCCCAAAGGACAATGAGGAGGAGGAAGAAGATTCTTGCAATTTCGGATGTAAAGAAGCCAAGGGAAACAATGAGCAAACCATTTTCGTTAAAGGATTTGAAAATCTGCGACCTAGGAATGAAATCAAGAATGCATTGACCAACTTTTTCTCTTCTTGTGGAGAGGTCACTAGGGTTTATGTTCCTTTTGAGTGTAGAAACCGCCTTCCCTTGGGGTTTGCTTTCATTGATCTGAGAAATGGTAAAGGCAACGAGAAGGCGTTAGAACTAAATGGAAGTTACATGGGAGGAAAGGAGCTTGAGGTGACTATGGCTTGTCGAAGAGACGAATACTGTGGCTTTATTGACTTTCATGGTTGTGATCGCTGTCAAATGTTTCTAGCCCCCCCTGTTTACAACCCCTCCTCGATTAAAAAGCAACGTATTTATTATTGGTGA
Protein:  
MEFWGAKVKAGKTLKVKPGENCLIHISQASLGKKAKKGGVSALLYATVDDKKLLLGTLSQDSFPHINFDHLLFDREFELSHSLDRGYVHFIGHQRNKKKKKRANNESSKVSVSFNTGKSVLQPCLESKTNLKKQKIHNEHSEEIKEMNKSIKELSEAVKTLQQILLRKADLPEEKEAPKDNEEEEEDSCNFGCKEAKGNNEQTIFVKGFENLRPRNEIKNALTNFFSSCGEVTRVYVPFECRNRLPLGFAFIDLRNGKGNEKALELNGSYMGGKELEVTMACRRDEYCGFIDFHGCDRCQMFLAPPVYNPSSIKKQRIYYW